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LOC112145934 epithelial membrane protein 2 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112145934, updated on 10-Jul-2024

Summary

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Gene symbol
LOC112145934
Gene description
epithelial membrane protein 2
See related
EnsemblRapid:ENSOMEG00005004789
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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Genomic context

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Location:
chromosome: LG8
Exon count:
5
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG8 NC_050519.1 (19741685..19743844, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096082.1 (4027964..4030123)

Linkage Group LG8 - NC_050519.1Genomic Context describing neighboring genes Neighboring gene transcription factor 20 Neighboring gene germ cell-specific gene 1-like protein Neighboring gene uncharacterized LOC112146618 Neighboring gene uncharacterized LOC118599030

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
epithelial membrane protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050519.1 Reference ASM292280v2 Primary Assembly

    Range
    19741685..19743844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024271422.1 → XP_024127190.1  epithelial membrane protein 2

    UniProtKB/TrEMBL
    A0A3B3BMG9, A0A834BZY8
    Related
    ENSOMEP00005009144.1, ENSOMET00005010470.1
    Conserved Domains (1) summary
    cl21598
    Location:2 → 153
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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