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GRIN2C glutamate ionotropic receptor NMDA type subunit 2C [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112117282, updated on 19-May-2024

Summary

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Gene symbol
GRIN2C
Gene description
glutamate ionotropic receptor NMDA type subunit 2C
See related
Ensembl:ENSTMTG00000014857
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664543.1 (13868236..13914276, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019962456.1 (309430..360844, complement)

NW_020664543.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 104 Neighboring gene N-acetyltransferase 9 Neighboring gene ferredoxin reductase Neighboring gene USH1 protein network component sans

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NMDA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in excitatory postsynaptic potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NMDA selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, NMDA 2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664543.1 Reference T_m_triunguis-2.0

    Range
    13868236..13914276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024215216.2 → XP_024070984.2  glutamate receptor ionotropic, NMDA 2C

    UniProtKB/TrEMBL
    A0A674JKF4
    Related
    ENSTMTP00000020422.1, ENSTMTT00000021138.1
    Conserved Domains (3) summary
    cd13718
    Location:401 → 802
    PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam10565
    Location:839 → 914
    NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
    cd06378
    Location:32 → 385
    PBP1_iGluR_NMDA_NR2; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
Nucleotide Protein
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