U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CASKIN2 CASK interacting protein 2 [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112116537, updated on 19-May-2024

Summary

Go to the top of the page Help
Gene symbol
CASKIN2
Gene description
CASK interacting protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664543.1 (14677039..14746439, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019962262.1 (397142..471412, complement)

NW_020664543.1Genomic Context describing neighboring genes Neighboring gene growth factor receptor bound protein 2 Neighboring gene transmembrane protein 94 Neighboring gene melanin-concentrating hormone receptor 1-like Neighboring gene tRNA splicing endonuclease subunit 54

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: caskin-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664543.1 Reference T_m_triunguis-2.0

    Range
    14677039..14746439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029912147.1 → XP_029768007.1  LOW QUALITY PROTEIN: caskin-2

    Conserved Domains (9) summary
    cd09497
    Location:456 → 521
    SAM_caskin1,2_repeat1; SAM domain of caskin protein repeat 1
    cd09498
    Location:522 → 592
    SAM_caskin1,2_repeat2; SAM domain of caskin protein repeat 2
    COG0666
    Location:79 → 209
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:86 → 113
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:8 → 111
    Ank_2; Ankyrin repeats (3 copies)
    pfam16600
    Location:354 → 385
    Caskin1-CID; Caskin1 CASK-interaction domain
    pfam16632
    Location:1400 → 1459
    Caskin-tail; C-terminal region of Caskin
    pfam16907
    Location:887 → 972
    Caskin-Pro-rich; Proline rich region of Caskin proteins
    cl17036
    Location:289 → 326
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.