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ITGA1 integrin subunit alpha 1 [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112113728, updated on 19-May-2024

Summary

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Gene symbol
ITGA1
Gene description
integrin subunit alpha 1
See related
Ensembl:ENSTMTG00000015089
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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See ITGA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664420.1 (25700425..25810894)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019961571.1 (1047910..1165354, complement)

NW_020664420.1Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) polymerase family member 8 Neighboring gene ISL LIM homeobox 1 Neighboring gene pelota mRNA surveillance and ribosome rescue factor Neighboring gene molybdopterin synthase catalytic subunit Neighboring gene molybdopterin synthase sulfur carrier subunit Neighboring gene integrin subunit alpha 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664420.1 Reference T_m_triunguis-2.0

    Range
    25700425..25810894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024210125.2 → XP_024065893.1  integrin alpha-1

    UniProtKB/TrEMBL
    A0A674JIW8
    Related
    ENSTMTP00000020628.1, ENSTMTT00000021348.1
    Conserved Domains (3) summary
    smart00191
    Location:567 → 620
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:172 → 352
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:663 → 1090
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
Heading Accession and Version

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