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RFX3 regulatory factor X3 [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112106767, updated on 19-May-2024

Summary

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Gene symbol
RFX3
Gene description
regulatory factor X3
See related
Ensembl:ENSTMTG00000016347
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664464.1 (16087939..16309347, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019959923.1 (2406026..2624541, complement)

NW_020664464.1Genomic Context describing neighboring genes Neighboring gene histone-arginine methyltransferase CARM1-like Neighboring gene pumilio RNA binding family member 3 Neighboring gene uncharacterized LOC112106762 Neighboring gene GLIS family zinc finger 3 Neighboring gene solute carrier family 1 member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor RFX3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664464.1 Reference T_m_triunguis-2.0

    Range
    16087939..16309347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026652401.1 → XP_026508186.1  transcription factor RFX3

    UniProtKB/TrEMBL
    A0A674JL75
    Related
    ENSTMTP00000022546.1, ENSTMTT00000023346.1
    Conserved Domains (2) summary
    pfam02257
    Location:184 → 256
    RFX_DNA_binding; RFX DNA-binding domain
    pfam04589
    Location:51 → 134
    RFX1_trans_act; RFX1 transcription activation region
Nucleotide Protein
Heading Accession and Version

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