U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATF3 activating transcription factor 3 [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112105088, updated on 19-May-2024

Summary

Go to the top of the page Help
Gene symbol
ATF3
Gene description
activating transcription factor 3
See related
Ensembl:ENSTMTG00000000758
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664471.1 (687152..698587, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019959612.1 (590387..602055, complement)

NW_020664471.1Genomic Context describing neighboring genes Neighboring gene NSL1 component of MIS12 kinetochore complex Neighboring gene basic leucine zipper ATF-like transcription factor 3 Neighboring gene neudesin neurotrophic factor Neighboring gene proton activated chloride channel 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cyclic AMP-dependent transcription factor ATF-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664471.1 Reference T_m_triunguis-2.0

    Range
    687152..698587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024197742.2 → XP_024053510.1  cyclic AMP-dependent transcription factor ATF-3 isoform X3

    Conserved Domains (1) summary
    cd14722
    Location:96 → 149
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  2. XM_024197741.2 → XP_024053509.1  cyclic AMP-dependent transcription factor ATF-3 isoform X2

    UniProtKB/TrEMBL
    A0A674HYM1
    Related
    ENSTMTP00000000899.1, ENSTMTT00000000923.1
    Conserved Domains (1) summary
    cd14722
    Location:126 → 179
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain

  3. XM_024197740.2 → XP_024053508.1  cyclic AMP-dependent transcription factor ATF-3 isoform X1

    UniProtKB/TrEMBL
    A0A674HX21
    Related
    ENSTMTP00000000900.1, ENSTMTT00000000924.1
    Conserved Domains (1) summary
    cd14722
    Location:158 → 211
    bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.