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HABP2 hyaluronan binding protein 2 [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112102298, updated on 19-May-2024

Summary

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Gene symbol
HABP2
Gene description
hyaluronan binding protein 2
See related
Ensembl:ENSTMTG00000014584
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664446.1 (11328393..11372461)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019959081.1 (412253..456825, complement)

NW_020664446.1Genomic Context describing neighboring genes Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene transcription factor 7 like 2 Neighboring gene nebulin related anchoring protein Neighboring gene caspase 7 Neighboring gene pleckstrin homology domain containing S1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronan-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664446.1 Reference T_m_triunguis-2.0

    Range
    11328393..11372461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024193489.3 → XP_024049257.1  hyaluronan-binding protein 2

    UniProtKB/TrEMBL
    A0A674JIY4
    Conserved Domains (3) summary
    cd00108
    Location:194 → 277
    KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
    cd00190
    Location:314 → 555
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam00008
    Location:79 → 109
    EGF; EGF-like domain

  2. XM_024193488.1 → XP_024049256.1  hyaluronan-binding protein 2

    UniProtKB/TrEMBL
    A0A674JIY4
    Related
    ENSTMTP00000019857.1, ENSTMTT00000020558.1
    Conserved Domains (3) summary
    cd00108
    Location:194 → 277
    KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
    cd00190
    Location:314 → 555
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam00008
    Location:79 → 109
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

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