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nedd4l NEDD4 like E3 ubiquitin protein ligase [ Salvelinus sp. IW2-2015 ]

Gene ID: 111980494, updated on 13-Aug-2024

Summary

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Gene symbol
nedd4l
Gene description
NEDD4 like E3 ubiquitin protein ligase
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG20
Exon count:
27
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG20 NC_036860.1 (66163931..66241902)

Linkage Group LG20 - NC_036860.1Genomic Context describing neighboring genes Neighboring gene alanine--glyoxylate aminotransferase 2 Neighboring gene prolactin receptor a Neighboring gene uncharacterized LOC111980811 Neighboring gene alpha-protein kinase 2-like Neighboring gene alpha-protein kinase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036860.1 Chromosome LG20 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium channel inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of sodium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEDD4-like
Names
neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036860.1 Reference ASM291031v2 Primary Assembly

    Range
    66163931..66241902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024011237.1 → XP_023867005.1  LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEDD4-like

    Conserved Domains (5) summary
    smart00456
    Location:724 → 756
    WW; Domain with 2 conserved Trp (W) residues
    smart00119
    Location:817 → 1146
    HECTc; Domain Homologous to E6-AP Carboxyl Terminus with
    pfam00397
    Location:341 → 370
    WW; WW domain
    cl14603
    Location:246 → 299
    C2; C2 domain
    cl26464
    Location:300 → 518
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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