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dlx5a distal-less homeobox 5a [ Salvelinus sp. IW2-2015 ]

Gene ID: 111955293, updated on 13-Aug-2024

Summary

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Gene symbol
dlx5a
Gene description
distal-less homeobox 5a
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Also known as
dlx5
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM291031v2 (GCF_002910315.2) Unplaced Scaffold NW_019942562.1 (464802..467506)

NW_019942562.1Genomic Context describing neighboring genes Neighboring gene protein argonaute-2-like Neighboring gene protein argonaute-2 Neighboring gene distal-less homeobox 6a Neighboring gene SEM1 26S proteasome subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019942562 Unplaced Scaffold Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Validation of reference genes for expression studies during craniofacial development in arctic charr. Ahi EP, et al. PLoS One, 2013. PMID 23785496, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure formation involved in morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryo development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein DLX-5
Names
distal-less homeobox 5
distal-less homeobox gene 5a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NW_019942562.1 Reference ASM291031v2 Primary Assembly

    Range
    464802..467506
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023975474.2 → XP_023831242.2  homeobox protein DLX-5

    Conserved Domains (2) summary
    pfam00046
    Location:143 → 197
    Homeobox; Homeobox domain
    pfam12413
    Location:32 → 120
    DLL_N; Homeobox protein distal-less-like N terminal
Nucleotide Protein
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Gene LinkOut

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