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TCF7L1 transcription factor 7 like 1 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111938914, updated on 3-Aug-2024

Summary

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Gene symbol
TCF7L1
Gene description
transcription factor 7 like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
11
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 22 Unlocalized Scaffold NW_019776529.1 (4586584..4599709, complement)

NW_019776529.1Genomic Context describing neighboring genes Neighboring gene retinol saturase Neighboring gene trans-golgi network protein 2 Neighboring gene drebrin like Neighboring gene AE binding protein 1 Neighboring gene DNA polymerase delta 2, accessory subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776529 Chromosome 22 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-catenin-TCF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor 7-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776529.1 Reference cyaCae2

    Range
    4586584..4599709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023940874.1 → XP_023796642.1  transcription factor 7-like 1

    Conserved Domains (2) summary
    cd01388
    Location:220 → 291
    SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
    pfam08347
    Location:1 → 125
    CTNNB1_binding; N-terminal CTNNB1 binding
Nucleotide Protein
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Gene LinkOut

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