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GPC4 glypican 4 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111928636, updated on 3-Aug-2024

Summary

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Gene symbol
GPC4
Gene description
glypican 4
See related
Ensembl:ENSCCEG00000012103
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 4 Unlocalized Scaffold NW_019776368.1 (7327965..7373618)

NW_019776368.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 6 Neighboring gene glypican 3 Neighboring gene heparan-sulfate 6-O-sulfotransferase 2 Neighboring gene muscleblind like splicing regulator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776368 Chromosome 4 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776368.1 Reference cyaCae2

    Range
    7327965..7373618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023926024.1 → XP_023781792.1  glypican-4

    UniProtKB/TrEMBL
    A0A8C0ZDL4
    Conserved Domains (1) summary
    pfam01153
    Location:1 → 483
    Glypican

  2. XM_023926025.1 → XP_023781793.1  glypican-4

    UniProtKB/TrEMBL
    A0A8C0ZDL4
    Related
    ENSCCEP00000012544.1, ENSCCET00000019541.1
    Conserved Domains (1) summary
    pfam01153
    Location:1 → 483
    Glypican
Nucleotide Protein
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