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pdzrn3b PDZ domain containing RING finger 3b [ Paramormyrops kingsleyae ]

Gene ID: 111834576, updated on 15-Mar-2024

Summary

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Gene symbol
pdzrn3b
Gene description
PDZ domain containing RING finger 3b
See related
Ensembl:ENSPKIG00000021461
Gene type
protein coding
RefSeq status
MODEL
Organism
Paramormyrops kingsleyae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
Also known as
pdzrn3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019715665.1 (788642..875568)

NW_019715665.1Genomic Context describing neighboring genes Neighboring gene cell adhesion molecule L1-like b Neighboring gene contactin 3b Neighboring gene glucoside xylosyltransferase 2 Neighboring gene SHQ1, H/ACA ribonucleoprotein assembly factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019715665 Unplaced Scaffold Reference PKINGS_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular junction development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase PDZRN3
Names
PDZ domain containing ring finger 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PKINGS_0.1

Genomic

  1. NW_019715665.1 Reference PKINGS_0.1

    Range
    788642..875568
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023794029.1 → XP_023649797.1  E3 ubiquitin-protein ligase PDZRN3 isoform X2

    UniProtKB/TrEMBL
    A0A3B3QC81

  2. XM_023794028.1 → XP_023649796.1  E3 ubiquitin-protein ligase PDZRN3 isoform X1

    UniProtKB/TrEMBL
    A0A3B3QC81, A0A3B3QFD8
    Related
    ENSPKIP00000004310.1, ENSPKIT00000028292.1
Nucleotide Protein
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