U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cdh8 cadherin 8 [ Seriola lalandi dorsalis ]

Gene ID: 111672331, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
cdh8
Gene description
cadherin 8
See related
Ensembl:ENSSLDG00000013857
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cdh8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525450.1 (2385521..2487496)

NW_019525450.1Genomic Context describing neighboring genes Neighboring gene phosphatase, orphan 2 Neighboring gene synapse associated protein 1 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 18 Neighboring gene phosphorylase kinase, beta

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019525450 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in axon terminus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic cleft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cadherin-8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525450.1 Reference Sedor1 Primary Assembly

    Range
    2385521..2487496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023429738.1 → XP_023285506.1  cadherin-8 isoform X1

    UniProtKB/TrEMBL
    A0A3B4XI08
    Related
    ENSSLDP00000017579.1, ENSSLDT00000018188.1
    Conserved Domains (3) summary
    cd11304
    Location:396 → 492
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:89 → 167
    CA; Cadherin repeats
    pfam01049
    Location:645 → 793
    Cadherin_C; Cadherin cytoplasmic region

  2. XM_023429739.1 → XP_023285507.1  cadherin-8 isoform X2

    Conserved Domains (3) summary
    cd11304
    Location:396 → 492
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:89 → 167
    CA; Cadherin repeats
    pfam01049
    Location:643 → 791
    Cadherin_C; Cadherin cytoplasmic region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.