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rasgrp1 RAS guanyl releasing protein 1 [ Seriola lalandi dorsalis ]

Gene ID: 111663201, updated on 7-Dec-2023

Summary

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Gene symbol
rasgrp1
Gene description
RAS guanyl releasing protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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See rasgrp1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525126.1 (1412581..1429149, complement)

NW_019525126.1Genomic Context describing neighboring genes Neighboring gene visual system homeobox 2 Neighboring gene synapse differentiation inducing 1 like Neighboring gene exonuclease 3'-5' domain containing 1 Neighboring gene delta-like protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525126 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAS guanyl-releasing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525126.1 Reference Sedor1 Primary Assembly

    Range
    1412581..1429149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023417305.1 → XP_023273073.1  RAS guanyl-releasing protein 1 isoform X2

    Conserved Domains (5) summary
    cd06224
    Location:93 → 194
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam06390
    Location:609 → 787
    NESP55; Neuroendocrine-specific golgi protein P55 (NESP55)
    smart00147
    Location:231 → 467
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    pfam00130
    Location:572 → 621
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam13499
    Location:508 → 557
    EF-hand_7; EF-hand domain pair

  2. XM_023417304.1 → XP_023273072.1  RAS guanyl-releasing protein 1 isoform X1

    Conserved Domains (5) summary
    cd06224
    Location:94 → 195
    REM; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal domain (RasGef_N), also called REM domain (Ras exchanger motif). This domain is common in nucleotide exchange factors for Ras-like small GTPases and is typically found immediately ...
    pfam06390
    Location:610 → 788
    NESP55; Neuroendocrine-specific golgi protein P55 (NESP55)
    smart00147
    Location:232 → 468
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    pfam00130
    Location:573 → 622
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam13499
    Location:509 → 558
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
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