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pcmtd1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [ Seriola lalandi dorsalis ]

Gene ID: 111653283, updated on 15-Mar-2024

Summary

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Gene symbol
pcmtd1
Gene description
protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
See related
Ensembl:ENSSLDG00000012936
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019524735.1 (493020..509255, complement)

NW_019524735.1Genomic Context describing neighboring genes Neighboring gene snail family zinc finger 2 Neighboring gene syntrophin, gamma 1 Neighboring gene ST18 C2H2C-type zinc finger transcription factor Neighboring gene RB1-inducible coiled-coil 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019524735 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-L-isoaspartate O-methyltransferase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019524735.1 Reference Sedor1 Primary Assembly

    Range
    493020..509255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023403800.1 → XP_023259568.1  protein-L-isoaspartate O-methyltransferase domain-containing protein 1

    UniProtKB/TrEMBL
    A0A3B4XJA9
    Related
    ENSSLDP00000016341.1, ENSSLDT00000016939.1
    Conserved Domains (2) summary
    cl02533
    Location:337 → 356
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
    cl28095
    Location:11 → 219
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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