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eogt EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111588777, updated on 18-Jun-2024

Summary

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Gene symbol
eogt
Gene description
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
See related
Ensembl:ENSAOCG00000005177
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 5 NC_072770.1 (18690180..18711158)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019375926.1 (343452..364411)

Chromosome 5 - NC_072770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111588782 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene TATA element modulatory factor 1 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene TAFA chemokine like family member 4b Neighboring gene chemokine-like protein TAFA-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase
Names
EGF domain specific O-linked N-acetylglucosamine transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072770.1 Reference ASM2253959v1 Primary Assembly

    Range
    18690180..18711158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023299336.3 → XP_023155104.2  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1

    UniProtKB/TrEMBL
    A0A3Q1C0S3
    Related
    ENSAOCP00000020802.2, ENSAOCT00000012119.2
    Conserved Domains (1) summary
    pfam04577
    Location:243 → 466
    DUF563; Protein of unknown function (DUF563)

  2. XM_055010416.1 → XP_054866391.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2

    UniProtKB/TrEMBL
    A0A3Q1C0S3
    Related
    ENSAOCP00000077532.1, ENSAOCT00000055865.1

  3. XM_035943428.2 → XP_035799321.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1

    UniProtKB/TrEMBL
    A0A3Q1C0S3
    Conserved Domains (1) summary
    pfam04577
    Location:243 → 466
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

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