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paqr6 progestin and adipoQ receptor family member VI [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111577921, updated on 18-Jun-2024

Summary

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Gene symbol
paqr6
Gene description
progestin and adipoQ receptor family member VI
See related
Ensembl:ENSAOCG00000019386
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 9 NC_072774.1 (13505997..13537404, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373101.1 (425723..457870)

Chromosome 9 - NC_072774.1Genomic Context describing neighboring genes Neighboring gene antifreeze protein type IV Neighboring gene neurotrophic tyrosine kinase, receptor, type 1 Neighboring gene SMG5 nonsense mediated mRNA decay factor Neighboring gene synaptic Ras GTPase activating protein 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
membrane progestin receptor delta
Names
progestin and adipoQ receptor family member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072774.1 Reference ASM2253959v1 Primary Assembly

    Range
    13505997..13537404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023284445.3 → XP_023140213.1  membrane progestin receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A3Q1BK17
    Related
    ENSAOCP00000014607.2, ENSAOCT00000023415.2
    Conserved Domains (1) summary
    pfam03006
    Location:137 → 364
    HlyIII; Haemolysin-III related

  2. XM_023284447.3 → XP_023140215.1  membrane progestin receptor delta isoform X3

    UniProtKB/TrEMBL
    A0A3Q1BK17
    Conserved Domains (1) summary
    pfam03006
    Location:43 → 270
    HlyIII; Haemolysin-III related

  3. XM_023284446.3 → XP_023140214.1  membrane progestin receptor delta isoform X2

    UniProtKB/TrEMBL
    A0A3Q1BK17
    Related
    ENSAOCP00000029182.2, ENSAOCT00000023147.2
    Conserved Domains (1) summary
    pfam03006
    Location:122 → 349
    HlyIII; Haemolysin-III related
Nucleotide Protein
Heading Accession and Version

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