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erg28 ergosterol biosynthesis 28 homolog [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111574572, updated on 18-Jun-2024

Summary

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Gene symbol
erg28
Gene description
ergosterol biosynthesis 28 homolog
See related
Ensembl:ENSAOCG00000033035
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 20 NC_072785.1 (16343540..16346728, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019372819.1 (15455..18572)

Chromosome 20 - NC_072785.1Genomic Context describing neighboring genes Neighboring gene Jun dimerization protein 2a Neighboring gene FLVCR choline and putative heme transporter 2a Neighboring gene tubulin tyrosine ligase-like family, member 5 Neighboring gene transforming growth factor, beta 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ergosterol biosynthetic protein 28 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072785.1 Reference ASM2253959v1 Primary Assembly

    Range
    16343540..16346728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023279255.3 → XP_023135023.1  ergosterol biosynthetic protein 28 homolog

    UniProtKB/TrEMBL
    A0A3Q1B5G4
    Conserved Domains (1) summary
    pfam03694
    Location:8 → 115
    Erg28; Erg28 like protein

  2. XM_023279256.3 → XP_023135024.1  ergosterol biosynthetic protein 28 homolog

    UniProtKB/TrEMBL
    A0A3Q1B5G4
    Related
    ENSAOCP00000034215.1, ENSAOCT00000084561.1
    Conserved Domains (1) summary
    pfam03694
    Location:8 → 115
    Erg28; Erg28 like protein
Nucleotide Protein
Heading Accession and Version

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