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LOC111568402 helicase with zinc finger domain 2 [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111568402, updated on 18-Jun-2024

Summary

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Gene symbol
LOC111568402
Gene description
helicase with zinc finger domain 2
See related
Ensembl:ENSAOCG00000005001
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Also known as
helz2
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Genomic context

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Location:
chromosome: 5
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 5 NC_072770.1 (1212117..1238187)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019372003.1 (579148..604349, complement)

Chromosome 5 - NC_072770.1Genomic Context describing neighboring genes Neighboring gene ethanolamine kinase 2 Neighboring gene solute carrier family 41 member 1 Neighboring gene probable LIM domain-containing serine/threonine-protein kinase DDB_G0286997 Neighboring gene uncharacterized LOC129349013 Neighboring gene serine/threonine-protein kinase 35-like Neighboring gene recombination signal binding protein for immunoglobulin kappa J region-like Neighboring gene matrilin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase with zinc finger domain 2
Names
helicase with zinc finger 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072770.1 Reference ASM2253959v1 Primary Assembly

    Range
    1212117..1238187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023270047.3 → XP_023125815.2  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A3Q1AL44
    Related
    ENSAOCP00000001927.2, ENSAOCT00000012377.2

RNA

  1. XR_004847312.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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