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lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111567352, updated on 18-Jun-2024

Summary

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Gene symbol
lamtor3
Gene description
late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
See related
Ensembl:ENSAOCG00000026934
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 20 NC_072785.1 (5801790..5814656)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019370063.1 (54289..65074)

Chromosome 20 - NC_072785.1Genomic Context describing neighboring genes Neighboring gene dual adaptor of phosphotyrosine and 3-phosphoinositides Neighboring gene uncharacterized LOC129347732 Neighboring gene odd-skipped related transcription factor 1 Neighboring gene uncharacterized LOC111580778

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellular response to amino acid stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of TOR signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ragulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ragulator complex protein LAMTOR3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072785.1 Reference ASM2253959v1 Primary Assembly

    Range
    5801790..5814656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023268421.3 → XP_023124189.1  ragulator complex protein LAMTOR3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1BCB2
    Related
    ENSAOCP00000007551.2, ENSAOCT00000002638.2
    Conserved Domains (1) summary
    pfam08923
    Location:3 → 121
    MAPKK1_Int; Mitogen-activated protein kinase kinase 1 interacting

  2. XM_023268439.3 → XP_023124207.1  ragulator complex protein LAMTOR3 isoform X3

    Conserved Domains (1) summary
    pfam08923
    Location:20 → 115
    MAPKK1_Int; Mitogen-activated protein kinase kinase 1 interacting

  3. XM_023268410.3 → XP_023124178.1  ragulator complex protein LAMTOR3 isoform X1

    Related
    ENSAOCP00000035308.1, ENSAOCT00000079473.1
    Conserved Domains (1) summary
    pfam08923
    Location:20 → 138
    MAPKK1_Int; Mitogen-activated protein kinase kinase 1 interacting
Nucleotide Protein
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