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PEX1 peroxisomal biogenesis factor 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111552481, updated on 15-Mar-2024

Summary

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Gene symbol
PEX1
Gene description
peroxisomal biogenesis factor 1
See related
Ensembl:ENSPTEG00000028666
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
24
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 8 NC_045441.1 (79699960..79743278)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317658.1 (4153072..4196387)

Chromosome 8 - NC_045441.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 133 member B Neighboring gene RNA binding motif protein 48 Neighboring gene GATA zinc finger domain containing 1 Neighboring gene mitochondrial intermembrane space import and assembly protein 40 pseudogene Neighboring gene protein lifeguard 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into peroxisome matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome biogenesis factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045441.1 Reference ASM277652v3

    Range
    79699960..79743278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023226737.1 → XP_023082505.1  peroxisome biogenesis factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C9I7P7, A0A8C9ICX0
    Related
    ENSPTEP00000029239.1, ENSPTET00000040677.1
    Conserved Domains (3) summary
    pfam09262
    Location:104 → 179
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    pfam09263
    Location:19 → 98
    PEX-2N; Peroxisome biogenesis factor 1, N-terminal
    cl27568
    Location:595 → 1065
    TIP49; TIP49 C-terminus

  2. XM_023226739.1 → XP_023082507.1  peroxisome biogenesis factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C9ICX0
    Conserved Domains (3) summary
    pfam09262
    Location:104 → 179
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    pfam09263
    Location:19 → 98
    PEX-2N; Peroxisome biogenesis factor 1, N-terminal
    cl27568
    Location:595 → 1065
    TIP49; TIP49 C-terminus

  3. XM_023226740.2 → XP_023082508.1  peroxisome biogenesis factor 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C9ICX0
    Conserved Domains (1) summary
    cl27568
    Location:386 → 856
    TIP49; TIP49 C-terminus

  4. XM_023226738.1 → XP_023082506.1  peroxisome biogenesis factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C9ICX0
    Conserved Domains (3) summary
    pfam09262
    Location:92 → 151
    PEX-1N; Peroxisome biogenesis factor 1, N-terminal
    pfam09263
    Location:19 → 91
    PEX-2N; Peroxisome biogenesis factor 1, N-terminal
    cl27568
    Location:567 → 1037
    TIP49; TIP49 C-terminus
Nucleotide Protein
Heading Accession and Version

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