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RNF43 ring finger protein 43 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111537631, updated on 15-Mar-2024

Summary

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Gene symbol
RNF43
Gene description
ring finger protein 43
See related
Ensembl:ENSPTEG00000039183
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See RNF43 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 16 NC_045449.1 (35630432..35695855)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317027.1 (15987314..16052905, complement)

Chromosome 16 - NC_045449.1Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 4 Neighboring gene protein SET-like Neighboring gene heat shock transcription factor 5 Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene uncharacterized LOC111537632 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene TSPO associated protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Wnt receptor catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045449.1 Reference ASM277652v3

    Range
    35630432..35695855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023204612.1 → XP_023060380.1  E3 ubiquitin-protein ligase RNF43 isoform X1

    UniProtKB/TrEMBL
    A0A8C9IVM4, A0A8C9M0D8
    Conserved Domains (3) summary
    cd16798
    Location:270 → 316
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
    cl26464
    Location:354 → 724
    Atrophin-1; Atrophin-1 family
    cl28883
    Location:87 → 186
    PA; Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At ...

  2. XM_023204613.1 → XP_023060381.1  E3 ubiquitin-protein ligase RNF43 isoform X1

    UniProtKB/TrEMBL
    A0A8C9IVM4, A0A8C9M0D8
    Conserved Domains (3) summary
    cd16798
    Location:270 → 316
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
    cl26464
    Location:354 → 724
    Atrophin-1; Atrophin-1 family
    cl28883
    Location:87 → 186
    PA; Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At ...

  3. XM_023204614.1 → XP_023060382.1  E3 ubiquitin-protein ligase RNF43 isoform X1

    UniProtKB/TrEMBL
    A0A8C9IVM4, A0A8C9M0D8
    Related
    ENSPTEP00000042939.1, ENSPTET00000057267.1
    Conserved Domains (3) summary
    cd16798
    Location:270 → 316
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
    cl26464
    Location:354 → 724
    Atrophin-1; Atrophin-1 family
    cl28883
    Location:87 → 186
    PA; Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At ...

  4. XM_023204615.1 → XP_023060383.1  E3 ubiquitin-protein ligase RNF43 isoform X2

    UniProtKB/TrEMBL
    A0A8C9M0D8, A0A8C9M1F1
    Related
    ENSPTEP00000042940.1, ENSPTET00000057268.1
    Conserved Domains (2) summary
    cd16798
    Location:229 → 275
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
    cl26464
    Location:313 → 683
    Atrophin-1; Atrophin-1 family

  5. XM_023204616.1 → XP_023060384.1  E3 ubiquitin-protein ligase RNF43 isoform X3

    UniProtKB/TrEMBL
    A0A8C9M0D8
    Related
    ENSPTEP00000042941.1, ENSPTET00000057269.1
    Conserved Domains (2) summary
    cd16798
    Location:143 → 189
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
    cl26464
    Location:227 → 597
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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