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SYVN1 synoviolin 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111522389, updated on 15-Mar-2024

Summary

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Gene symbol
SYVN1
Gene description
synoviolin 1
See related
Ensembl:ENSPTEG00000023595
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See SYVN1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 13 NC_045446.1 (8967837..8975746)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318145.1 (2146521..2154924, complement)

Chromosome 13 - NC_045446.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L21 Neighboring gene HIG1 domain family member 1A, mitochondrial pseudogene Neighboring gene mitochondrial ribosomal protein L49 Neighboring gene FAU ubiquitin like and ribosomal protein S30 fusion Neighboring gene zinc finger HIT-type containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase synoviolin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045446.1 Reference ASM277652v3

    Range
    8967837..8975746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023186439.3 → XP_023042207.1  E3 ubiquitin-protein ligase synoviolin isoform X1

    UniProtKB/TrEMBL
    A0A8C9HKI9, A0A8C9LRW3
    Related
    ENSPTEP00000022721.1
    Conserved Domains (2) summary
    cl26329
    Location:10 → 333
    zf-rbx1; RING-H2 zinc finger domain
    cl26464
    Location:533 → 606
    Atrophin-1; Atrophin-1 family

  2. XM_023186440.3 → XP_023042208.1  E3 ubiquitin-protein ligase synoviolin isoform X2

    UniProtKB/TrEMBL
    A0A8C9LRW3
    Related
    ENSPTEP00000022723.1
    Conserved Domains (2) summary
    cl26329
    Location:10 → 333
    zf-rbx1; RING-H2 zinc finger domain
    cl26464
    Location:532 → 605
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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