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EFCAB5 EF-hand calcium binding domain 5 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111520837, updated on 15-Mar-2024

Summary

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Gene symbol
EFCAB5
Gene description
EF-hand calcium binding domain 5
See related
Ensembl:ENSPTEG00000033593
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
23
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 16 NC_045449.1 (24537011..24712060)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318078.1 (2805587..2980112)

Chromosome 16 - NC_045449.1Genomic Context describing neighboring genes Neighboring gene slingshot protein phosphatase 2 Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene syntaxin-18 pseudogene Neighboring gene sororin-like Neighboring gene nuclear speckle splicing regulatory protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand calcium-binding domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045449.1 Reference ASM277652v3

    Range
    24537011..24712060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023183936.1 → XP_023039704.1  EF-hand calcium-binding domain-containing protein 5

    UniProtKB/TrEMBL
    A0A8C9IGS6
    Related
    ENSPTEP00000035638.1, ENSPTET00000048462.1
    Conserved Domains (3) summary
    smart00065
    Location:1084 → 1176
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam05186
    Location:170 → 222
    Dpy-30; Dpy-30 motif
    pfam10243
    Location:489 → 724
    MIP-T3; Microtubule-binding protein MIP-T3
Nucleotide Protein
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