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trabd2a TraB domain containing 2A [ Seriola dumerili (greater amberjack) ]

Gene ID: 111238961, updated on 12-Sep-2024

Summary

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Gene symbol
trabd2a
Gene description
TraB domain containing 2A
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019176070.1 (833200..889260)

NW_019176070.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 170 Neighboring gene hook microtubule-tethering protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019176070 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metalloprotease TIKI1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019176070.1 Reference Sdu_1.0 Primary Assembly

    Range
    833200..889260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022768697.1 → XP_022624418.1  metalloprotease TIKI1

    Conserved Domains (1) summary
    pfam01963
    Location:42 → 350
    TraB; TraB family
Nucleotide Protein
Heading Accession and Version

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