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plppr3b phospholipid phosphatase related 3b [ Seriola dumerili (greater amberjack) ]

Gene ID: 111236195, updated on 12-Sep-2024

Summary

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Gene symbol
plppr3b
Gene description
phospholipid phosphatase related 3b
See related
Ensembl:ENSSDUG00000015399
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
plppr3
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174847.1 (145813..151410)

NW_019174847.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 259 Neighboring gene mediator complex subunit 16 Neighboring gene mitotic spindle positioning Neighboring gene paralemmin 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174847 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase-related protein type 3
Names
phospholipid phosphatase related 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174847.1 Reference Sdu_1.0 Primary Assembly

    Range
    145813..151410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022764860.1 → XP_022620581.1  phospholipid phosphatase-related protein type 3

    UniProtKB/TrEMBL
    A0A3B4URV9, A0A3B4US75
    Related
    ENSSDUP00000021169.1, ENSSDUT00000021555.1
    Conserved Domains (1) summary
    cd03384
    Location:126 → 275
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
Nucleotide Protein
Heading Accession and Version

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