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ASCL1 achaete-scute family bHLH transcription factor 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111187815, updated on 15-Mar-2024

Summary

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Gene symbol
ASCL1
Gene description
achaete-scute family bHLH transcription factor 1
See related
Ensembl:ENSDLEG00000013714
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098037.1 (7910139..7912941)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160920.1 (4287296..4290106)

NW_022098037.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111187900 Neighboring gene phenylalanine hydroxylase Neighboring gene U1 spliceosomal RNA Neighboring gene chromosome unknown C12orf42 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
achaete-scute homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098037.1 Reference ASM228892v3 Primary Assembly

    Range
    7910139..7912941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022599829.2 → XP_022455537.1  achaete-scute homolog 1

    UniProtKB/TrEMBL
    A0A2Y9QJY2
    Related
    ENSDLEP00000018841.1, ENSDLET00000020772.1
    Conserved Domains (1) summary
    smart00353
    Location:123 → 165
    HLH; helix loop helix domain
Nucleotide Protein
Heading Accession and Version

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