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PSPN persephin [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111165930, updated on 15-Mar-2024

Summary

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Gene symbol
PSPN
Gene description
persephin
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See PSPN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098054.1 (3246945..3249923)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160955.1 (3226575..3228549)

NW_022098054.1Genomic Context describing neighboring genes Neighboring gene KH-type splicing regulatory protein Neighboring gene adenylate kinase isoenzyme 1 Neighboring gene general transcription factor IIF subunit 1 Neighboring gene uncharacterized LOC111166136 Neighboring gene alkB homolog 7 Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene alkaline ceramidase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glial cell-derived neurotrophic factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
persephin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098054.1 Reference ASM228892v3 Primary Assembly

    Range
    3246945..3249923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030764481.1 → XP_030620341.1  persephin isoform X1

    UniProtKB/TrEMBL
    A0A7F8KC13
    Conserved Domains (1) summary
    cd19382
    Location:125 → 217
    TGF_beta_Persephin; transforming growth factor beta (TGF-beta) like domain found in Persephin and similar proteins

  2. XM_022557000.2 → XP_022412708.2  persephin isoform X2

    UniProtKB/TrEMBL
    A0A2Y9M5R6
    Conserved Domains (1) summary
    cd19382
    Location:97 → 189
    TGF_beta_Persephin; transforming growth factor beta (TGF-beta) like domain found in Persephin and similar proteins
Nucleotide Protein
Heading Accession and Version

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