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sar1b secretion associated, Ras related GTPase 1B [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110965272, updated on 15-Mar-2024

Summary

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Gene symbol
sar1b
Gene description
secretion associated, Ras related GTPase 1B
See related
Ensembl:ENSAPOG00000007186
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 17 NC_067129.1 (3890976..3902068)

Chromosome 17 - NC_067129.1Genomic Context describing neighboring genes Neighboring gene calcium modulating ligand Neighboring gene SEC24 homolog A, COPII coat complex component Neighboring gene jade family PHD finger 2 Neighboring gene E3 SUMO-protein ligase ZBED1-like Neighboring gene CDKN2A interacting protein N-terminal like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067129.1 Chromosome 17 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of COPII vesicle coating IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP-binding protein SAR1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067129.1 Reference KAUST_Apoly_ChrSc

    Range
    3890976..3902068
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022214250.2 → XP_022069942.1  GTP-binding protein SAR1b

    UniProtKB/TrEMBL
    A0A3Q1GAE3
    Related
    ENSAPOP00000024612.1
    Conserved Domains (1) summary
    cd00879
    Location:3 → 197
    Sar1; Sar1 is an essential component of COPII vesicle coats
Nucleotide Protein
Heading Accession and Version

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