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mef2b myocyte enhancer factor 2b [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110949732, updated on 15-Mar-2024

Summary

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Gene symbol
mef2b
Gene description
myocyte enhancer factor 2b
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 4 NC_067116.1 (37986286..38005001)

Chromosome 4 - NC_067116.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor 2C2-associated protein Neighboring gene regulatory factor X-associated ankyrin-containing protein Neighboring gene BLOC-1 related complex subunit 8 Neighboring gene transmembrane protein 221 Neighboring gene transmembrane protein 161A Neighboring gene uncharacterized LOC110949696

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067116.1 Chromosome 4 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myocyte-specific enhancer factor 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067116.1 Reference KAUST_Apoly_ChrSc

    Range
    37986286..38005001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022191924.2 → XP_022047616.1  myocyte-specific enhancer factor 2B

    UniProtKB/TrEMBL
    A0A3Q1F3Y1
    Conserved Domains (2) summary
    cd00265
    Location:87 → 163
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam09606
    Location:331 → 499
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
Nucleotide Protein
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