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CNN1 calponin 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110593824, updated on 15-Mar-2024

Summary

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Gene symbol
CNN1
Gene description
calponin 1
See related
EnsemblRapid:ENSNSCG00000022957
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See CNN1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 1 NC_058403.1 (206320486..206327018, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734403.1 (1798951..1804989, complement)

Chromosome 1 - NC_058403.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 5, tartrate resistant Neighboring gene elongation factor 1 Neighboring gene ECSIT signaling integrator Neighboring gene zinc finger protein 653

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calponin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058403.1 Reference ASM220157v2

    Range
    206320486..206327018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021705225.2 → XP_021560900.1  calponin-1

    UniProtKB/TrEMBL
    A0A2Y9IHL1
    Related
    ENSNSCP00000029070.1
    Conserved Domains (2) summary
    pfam00402
    Location:164 → 188
    Calponin; Calponin family repeat
    cd21282
    Location:27 → 134
    CH_CNN1; calponin homology (CH) domain found in calponin-1 and similar proteins
Nucleotide Protein
Heading Accession and Version

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