U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NUP98 nucleoporin 98 and 96 precursor [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110593375, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NUP98
Gene description
nucleoporin 98 and 96 precursor
See related
EnsemblRapid:ENSNSCG00000019877
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 11
Exon count:
33
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 11 NC_058413.1 (51914254..52034211)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734401.1 (9946278..10066068, complement)

Chromosome 11 - NC_058413.1Genomic Context describing neighboring genes Neighboring gene ras homolog family member G Neighboring gene post-GPI attachment to proteins 2 Neighboring gene 40S ribosomal protein S10-like Neighboring gene cholinergic receptor nicotinic alpha 10 subunit Neighboring gene ADP-ribosyltransferase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore cytoplasmic filaments IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nuclear pore complex protein Nup98-Nup96

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058413.1 Reference ASM220157v2

    Range
    51914254..52034211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021704647.2 → XP_021560322.1  nuclear pore complex protein Nup98-Nup96 isoform X4

    UniProtKB/TrEMBL
    A0A2Y9I8M6
    Conserved Domains (3) summary
    pfam04096
    Location:568 → 707
    Nucleoporin2; Nucleoporin autopeptidase
    pfam12110
    Location:1162 → 1451
    Nup96; Nuclear protein 96
    pfam13634
    Location:67 → 160
    Nucleoporin_FG; Nucleoporin FG repeat region

  2. XM_021704644.2 → XP_021560319.1  nuclear pore complex protein Nup98-Nup96 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9ID70
    Related
    ENSNSCP00000025744.1
    Conserved Domains (3) summary
    pfam04096
    Location:740 → 879
    Nucleoporin2; Nucleoporin autopeptidase
    pfam12110
    Location:1334 → 1623
    Nup96; Nuclear protein 96
    pfam13634
    Location:40 → 149
    Nucleoporin_FG; Nucleoporin FG repeat region

  3. XM_021704645.2 → XP_021560320.1  nuclear pore complex protein Nup98-Nup96 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9IFZ5
    Related
    ENSNSCP00000025767.1
    Conserved Domains (4) summary
    pfam04096
    Location:723 → 862
    Nucleoporin2; Nucleoporin autopeptidase
    pfam12110
    Location:1317 → 1606
    Nup96; Nuclear protein 96
    pfam13634
    Location:40 → 149
    Nucleoporin_FG; Nucleoporin FG repeat region
    cl25496
    Location:243 → 666
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  4. XM_021704646.2 → XP_021560321.1  nuclear pore complex protein Nup98-Nup96 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9I996
    Conserved Domains (4) summary
    pfam04096
    Location:664 → 803
    Nucleoporin2; Nucleoporin autopeptidase
    pfam12110
    Location:1258 → 1547
    Nup96; Nuclear protein 96
    pfam13634
    Location:180 → 273
    Nucleoporin_FG; Nucleoporin FG repeat region
    cl25496
    Location:184 → 607
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.