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CFTR CF transmembrane conductance regulator [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110588952, updated on 15-Mar-2024

Summary

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Gene symbol
CFTR
Gene description
CF transmembrane conductance regulator
See related
EnsemblRapid:ENSNSCG00000019947
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
28
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 12 NC_058414.1 (73662211..73829489)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734380.1 (11281005..11448689)

Chromosome 12 - NC_058414.1Genomic Context describing neighboring genes Neighboring gene Wnt family member 2 Neighboring gene ankyrin repeat, SAM and basic leucine zipper domain containing 1 Neighboring gene bublin coiled-coil protein-like Neighboring gene cortactin binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicarbonate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystic fibrosis transmembrane conductance regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058414.1 Reference ASM220157v2

    Range
    73662211..73829489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021699342.1 → XP_021555017.1  cystic fibrosis transmembrane conductance regulator

    UniProtKB/TrEMBL
    A0A2Y9HTW3
    Related
    ENSNSCP00000025779.1, ENSNSCT00000029072.1
    Conserved Domains (1) summary
    cl28181
    Location:109 → 1561
    AAA; ATPases associated with a variety of cellular activities
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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