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DEAF1 DEAF1 transcription factor [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110582222, updated on 15-Mar-2024

Summary

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Gene symbol
DEAF1
Gene description
DEAF1 transcription factor
See related
EnsemblRapid:ENSNSCG00000017509
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See DEAF1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 11 NC_058413.1 (441841..467392, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734342.1 (433050..458611, complement)

Chromosome 11 - NC_058413.1Genomic Context describing neighboring genes Neighboring gene cadherin related family member 5 Neighboring gene dopamine receptor D4 Neighboring gene transmembrane protein 80 Neighboring gene EPS8 signaling adaptor L2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deformed epidermal autoregulatory factor 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058413.1 Reference ASM220157v2

    Range
    441841..467392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021692175.1 → XP_021547850.1  deformed epidermal autoregulatory factor 1 homolog

    UniProtKB/TrEMBL
    A0A2Y9HDR6
    Related
    ENSNSCP00000021917.1, ENSNSCT00000024748.1
    Conserved Domains (2) summary
    pfam01342
    Location:198 → 272
    SAND; SAND domain
    pfam01753
    Location:504 → 540
    zf-MYND; MYND finger
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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