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VANGL1 VANGL planar cell polarity protein 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110580415, updated on 15-Mar-2024

Summary

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Gene symbol
VANGL1
Gene description
VANGL planar cell polarity protein 1
See related
EnsemblRapid:ENSNSCG00000014614
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 4 NC_058406.1 (96022982..96061236)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734329.1 (4222035..4260289, complement)

Chromosome 4 - NC_058406.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 2 Neighboring gene nerve growth factor Neighboring gene calsequestrin 2 Neighboring gene nescient helix-loop-helix 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vang-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058406.1 Reference ASM220157v2

    Range
    96022982..96061236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044914593.1 → XP_044770528.1  vang-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8M1MD89

  2. XM_021690110.1 → XP_021545785.1  vang-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9H7E7
    Related
    ENSNSCP00000018162.1, ENSNSCT00000020534.1
    Conserved Domains (1) summary
    pfam06638
    Location:25 → 524
    Strabismus; Strabismus protein

  3. XM_044914594.1 → XP_044770529.1  vang-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8M1MHY7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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