U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CNTNAP1 contactin associated protein 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110573308, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CNTNAP1
Gene description
contactin associated protein 1
See related
EnsemblRapid:ENSNSCG00000013807
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 15
Exon count:
24
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 15 NC_058417.1 (40563626..40578019)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734286.1 (2081696..2096090, complement)

Chromosome 15 - NC_058417.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology, MyTH4 and FERM domain containing H3 Neighboring gene C-C motif chemokine receptor 10 Neighboring gene enhancer of zeste 1 polycomb repressive complex 2 subunit Neighboring gene receptor activity modifying protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
contactin-associated protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058417.1 Reference ASM220157v2

    Range
    40563626..40578019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021681791.1 → XP_021537466.1  contactin-associated protein 1

    UniProtKB/TrEMBL
    A0A2Y9GEF4
    Related
    ENSNSCP00000017225.1, ENSNSCT00000019483.1
    Conserved Domains (6) summary
    smart00294
    Location:1303 → 1321
    4.1m; putative band 4.1 homologues' binding motif
    smart00282
    Location:1082 → 1217
    LamG; Laminin G domain
    cd00057
    Location:35 → 166
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00110
    Location:173 → 329
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl00085
    Location:583 → 657
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
    pfam00008
    Location:543 → 574
    EGF; EGF-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.