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LOC110535755 acetyl-CoA carboxylase 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110535755, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110535755
Gene description
acetyl-CoA carboxylase 2
See related
Ensembl:ENSOMYG00000015903
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
acacb
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Genomic context

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Location:
chromosome: 11
Exon count:
60
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 11 NC_048575.1 (46163019..46203981)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 11 NC_035087.1 (43180521..43221128)

Chromosome 11 - NC_048575.1Genomic Context describing neighboring genes Neighboring gene pescadillo Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 2 Neighboring gene polymerase (DNA directed), epsilon Neighboring gene forkhead box protein N4 Neighboring gene unconventional myosin-Ih Neighboring gene BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches. Salem M, et al. BMC Genomics, 2010 Oct 13. PMID 20942956, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-CoA carboxylase 2; acetyl-CoA carboxylase
Names
acetyl-CoA carboxylase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048575.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    46163019..46203981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036935533.1 → XP_036791428.1  acetyl-CoA carboxylase isoform X1

    UniProtKB/TrEMBL
    A0A060WUV1
    Conserved Domains (4) summary
    COG0439
    Location:255 → 758
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:890 → 956
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1784 → 2342
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:957 → 1692
    ACC_central; Acetyl-CoA carboxylase, central region

  2. XM_036935537.1 → XP_036791432.1  acetyl-CoA carboxylase isoform X3

    UniProtKB/TrEMBL
    A0A060WUV1
    Related
    ENSOMYP00000037210.2, ENSOMYT00000040623.2
    Conserved Domains (4) summary
    COG0439
    Location:255 → 758
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:890 → 956
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1784 → 2338
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:957 → 1692
    ACC_central; Acetyl-CoA carboxylase, central region

  3. XM_036935538.1 → XP_036791433.1  acetyl-CoA carboxylase isoform X4

    UniProtKB/TrEMBL
    A0A060WUV1
    Conserved Domains (4) summary
    COG0439
    Location:255 → 758
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:890 → 956
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1779 → 2337
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:957 → 1687
    ACC_central; Acetyl-CoA carboxylase, central region

  4. XM_036935539.1 → XP_036791434.1  acetyl-CoA carboxylase isoform X5

    UniProtKB/TrEMBL
    A0A060WUV1
    Conserved Domains (4) summary
    COG0439
    Location:255 → 758
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:890 → 956
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1776 → 2334
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:957 → 1684
    ACC_central; Acetyl-CoA carboxylase, central region

  5. XM_036935540.1 → XP_036791435.1  acetyl-CoA carboxylase isoform X6

    UniProtKB/TrEMBL
    A0A060WUV1
    Related
    ENSOMYP00000037267.2, ENSOMYT00000040682.2
    Conserved Domains (4) summary
    COG0439
    Location:255 → 758
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:890 → 956
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1776 → 2330
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:957 → 1684
    ACC_central; Acetyl-CoA carboxylase, central region

  6. XM_036935535.1 → XP_036791430.1  acetyl-CoA carboxylase isoform X2

    UniProtKB/TrEMBL
    A0A060WUV1
    Conserved Domains (4) summary
    COG0439
    Location:255 → 758
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:890 → 956
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1784 → 2342
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:957 → 1692
    ACC_central; Acetyl-CoA carboxylase, central region

  7. XM_036935536.1 → XP_036791431.1  acetyl-CoA carboxylase isoform X1

    UniProtKB/TrEMBL
    A0A060WUV1
    Conserved Domains (4) summary
    COG0439
    Location:255 → 758
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:890 → 956
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1784 → 2342
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:957 → 1692
    ACC_central; Acetyl-CoA carboxylase, central region

  8. XM_036935544.1 → XP_036791439.1  acetyl-CoA carboxylase 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C7QKY4
    Conserved Domains (4) summary
    COG0439
    Location:40 → 543
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:675 → 741
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1569 → 2127
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:742 → 1477
    ACC_central; Acetyl-CoA carboxylase, central region

  9. XM_036935542.1 → XP_036791437.1  acetyl-CoA carboxylase 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C7QKY4
    Conserved Domains (4) summary
    COG0439
    Location:40 → 543
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:675 → 741
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1569 → 2127
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:742 → 1477
    ACC_central; Acetyl-CoA carboxylase, central region

  10. XM_036935543.1 → XP_036791438.1  acetyl-CoA carboxylase 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C7QKY4
    Conserved Domains (4) summary
    COG0439
    Location:40 → 543
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:675 → 741
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1569 → 2127
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:742 → 1477
    ACC_central; Acetyl-CoA carboxylase, central region

  11. XM_036935541.1 → XP_036791436.1  acetyl-CoA carboxylase 2 isoform X7

    UniProtKB/TrEMBL
    A0A8C7QKY4
    Conserved Domains (4) summary
    COG0439
    Location:52 → 555
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:687 → 753
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1581 → 2139
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:754 → 1489
    ACC_central; Acetyl-CoA carboxylase, central region

  12. XM_036935547.1 → XP_036791442.1  acetyl-CoA carboxylase 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C7QKY4
    Related
    ENSOMYP00000037510.2, ENSOMYT00000040962.2
    Conserved Domains (4) summary
    COG0439
    Location:40 → 543
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:675 → 741
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1569 → 2127
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:742 → 1477
    ACC_central; Acetyl-CoA carboxylase, central region

  13. XM_036935546.1 → XP_036791441.1  acetyl-CoA carboxylase 2 isoform X8

    UniProtKB/TrEMBL
    A0A8C7QKY4
    Related
    ENSOMYP00000038242.2, ENSOMYT00000041776.2
    Conserved Domains (4) summary
    COG0439
    Location:40 → 543
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:675 → 741
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1569 → 2127
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:742 → 1477
    ACC_central; Acetyl-CoA carboxylase, central region
Nucleotide Protein
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