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LOC110527179 retinoic acid-induced protein 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110527179, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110527179
Gene description
retinoic acid-induced protein 2
See related
Ensembl:ENSOMYG00000031468
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
rai2
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Genomic context

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See LOC110527179 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 18 NC_048582.1 (7104264..7133750, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 7 NC_035083.1 (812651..820719)

Chromosome 18 - NC_048582.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase-like 5 Neighboring gene polycomb protein SCMH1 Neighboring gene Nance-Horan syndrome b (congenital cataracts and dental anomalies) Neighboring gene angiotensin-converting enzyme 2 Neighboring gene uncharacterized LOC110500300

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in animal organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoic acid-induced protein 2
Names
retinoic acid induced 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048582.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    7104264..7133750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036951534.1 → XP_036807429.1  retinoic acid-induced protein 2

    UniProtKB/TrEMBL
    A0A8C7LRU3, A0A8C7M1A4

  2. XM_036951533.1 → XP_036807428.1  retinoic acid-induced protein 2

    UniProtKB/TrEMBL
    A0A8C7LRU3, A0A8C7M1A4
    Related
    ENSOMYP00000005100.2, ENSOMYT00000005696.2
Nucleotide Protein
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