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fbxw8 F-box and WD repeat domain containing 8 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110526010, updated on 15-Mar-2024

Summary

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Gene symbol
fbxw8
Gene description
F-box and WD repeat domain containing 8
See related
Ensembl:ENSOMYG00000044069
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See fbxw8 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 6 NC_048570.1 (44309894..44345449, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 6 NC_035082.1 (40721201..40748472, complement)

Chromosome 6 - NC_048570.1Genomic Context describing neighboring genes Neighboring gene F-box only protein 21 Neighboring gene calcineurin B homologous protein 3 Neighboring gene uncharacterized LOC110526014 Neighboring gene SREBP regulating gene protein Neighboring gene cytosolic arginine sensor for mTORC1 subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/WD repeat-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048570.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    44309894..44345449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036980168.1 → XP_036836063.1  F-box/WD repeat-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A8C7UKD4
    Conserved Domains (3) summary
    COG2319
    Location:232 → 557
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:456 → 484
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:162 → 203
    F-box-like

  2. XM_036980169.1 → XP_036836064.1  F-box/WD repeat-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A8C7UKD4
    Conserved Domains (3) summary
    COG2319
    Location:232 → 557
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:456 → 484
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:162 → 203
    F-box-like

  3. XM_036980167.1 → XP_036836062.1  F-box/WD repeat-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A8C7UKD4
    Conserved Domains (3) summary
    COG2319
    Location:232 → 557
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:456 → 484
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:162 → 203
    F-box-like

  4. XM_021606588.2 → XP_021462263.2  F-box/WD repeat-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A8C7UKD4, A0A8C7WFG4
    Related
    ENSOMYP00000096816.2, ENSOMYT00000105189.2
    Conserved Domains (3) summary
    COG2319
    Location:232 → 552
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:451 → 479
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:162 → 203
    F-box-like
Nucleotide Protein
Heading Accession and Version

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