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LOC110515528 EF-hand domain family, member B [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110515528, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110515528
Gene description
EF-hand domain family, member B
See related
Ensembl:ENSOMYG00000006804
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
efhb
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 3 NC_048567.1 (25568039..25575807, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 3 NC_035079.1 (28931983..28939625, complement)

Chromosome 3 - NC_048567.1Genomic Context describing neighboring genes Neighboring gene DNA-binding protein SATB1 Neighboring gene m-AAA protease-interacting protein 1, mitochondrial Neighboring gene ras-related protein Rab-5A Neighboring gene protein phosphatase 2C-like domain-containing protein 1 Neighboring gene zinc finger protein 385D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand domain-containing family member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048567.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    25568039..25575807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021594403.2 → XP_021450078.2  EF-hand domain-containing family member B

    UniProtKB/TrEMBL
    A0A060WC09, A0A8C7NWM1
    Related
    ENSOMYP00000013732.2, ENSOMYT00000015204.2
    Conserved Domains (1) summary
    pfam13499
    Location:323 → 386
    EF-hand_7; EF-hand domain pair
Nucleotide Protein
Heading Accession and Version

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