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LOC110508398 spermatogenesis-associated protein 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110508398, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110508398
Gene description
spermatogenesis-associated protein 2
See related
Ensembl:ENSOMYG00000066424
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
spata2
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Genomic context

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Location:
chromosome: 28
Exon count:
4
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 28 NC_048592.1 (6366101..6372255, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 28 NC_035104.1 (6096103..6102064, complement)

Chromosome 28 - NC_048592.1Genomic Context describing neighboring genes Neighboring gene EMILIN-3 Neighboring gene uncharacterized LOC118944869 Neighboring gene zinc finger protein 313 Neighboring gene nuclear receptor coactivator 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein linear deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of necroptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis-associated protein 2
Names
spermatogenesis associated 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048592.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    6366101..6372255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021588906.2 → XP_021444581.2  spermatogenesis-associated protein 2

    UniProtKB/TrEMBL
    A0A060XC51, A0A8K9X3A5

  2. XM_021588907.2 → XP_021444582.2  spermatogenesis-associated protein 2

    UniProtKB/TrEMBL
    A0A060XC51, A0A8K9X3A5
    Related
    ENSOMYP00000127614.1, ENSOMYT00000150405.1
Nucleotide Protein
Heading Accession and Version

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