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KIAA1549 KIAA1549 ortholog [ Lonchura striata (white-rumped munia) ]

Gene ID: 110473734, updated on 13-Aug-2024

Summary

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Gene symbol
KIAA1549
Gene description
KIAA1549 ortholog
Locus tag
RLOC_00004023
See related
Ensembl:ENSLSDG00000015068
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
22
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 1A NC_042566.1 (60262632..60403736, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018654752.1 (2720937..2862042)

Chromosome 1A - NC_042566.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V0 subunit a4 Neighboring gene transmembrane protein 213 Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene thromboxane A synthase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
UPF0606 protein KIAA1549 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042566.1 Reference lonStrDom2 Primary Assembly

    Range
    60262632..60403736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021536569.1 → XP_021392244.1  UPF0606 protein KIAA1549 homolog isoform X5

    UniProtKB/TrEMBL
    A0A218UY15
    Conserved Domains (2) summary
    pfam12877
    Location:1010 → 1684
    DUF3827; Domain of unknown function (DUF3827)
    cl25496
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_021536598.1 → XP_021392273.1  UPF0606 protein KIAA1549 homolog isoform X10

    UniProtKB/TrEMBL
    A0A218UY15
    Related
    ENSLSDP00000021348.1, ENSLSDT00000024091.1
    Conserved Domains (2) summary
    pfam05109
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12877
    Location:1010 → 1675
    DUF3827; Domain of unknown function (DUF3827)

  3. XM_031507962.1 → XP_031363822.1  UPF0606 protein KIAA1549 homolog isoform X6

    UniProtKB/TrEMBL
    A0A218UY15
    Conserved Domains (2) summary
    pfam05109
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12877
    Location:1010 → 1680
    DUF3827; Domain of unknown function (DUF3827)

  4. XM_021536577.2 → XP_021392252.1  UPF0606 protein KIAA1549 homolog isoform X7

    UniProtKB/TrEMBL
    A0A218UY15
    Related
    ENSLSDP00000021331.1
    Conserved Domains (3) summary
    PHA03247
    Location:1614 → 1848
    PHA03247; large tegument protein UL36; Provisional
    pfam05109
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12877
    Location:1010 → 1684
    DUF3827; Domain of unknown function (DUF3827)

  5. XM_021536589.1 → XP_021392264.1  UPF0606 protein KIAA1549 homolog isoform X9

    UniProtKB/TrEMBL
    A0A218UY15
    Related
    ENSLSDP00000021360.1, ENSLSDT00000024107.1
    Conserved Domains (3) summary
    PHA03247
    Location:1614 → 1809
    PHA03247; large tegument protein UL36; Provisional
    pfam05109
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12877
    Location:1010 → 1684
    DUF3827; Domain of unknown function (DUF3827)

  6. XM_021536583.1 → XP_021392258.1  UPF0606 protein KIAA1549 homolog isoform X8

    UniProtKB/TrEMBL
    A0A218UY15
    Related
    ENSLSDP00000021367.1, ENSLSDT00000024115.1
    Conserved Domains (2) summary
    pfam05109
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    pfam12877
    Location:1010 → 1684
    DUF3827; Domain of unknown function (DUF3827)

  7. XM_021536547.1 → XP_021392222.1  UPF0606 protein KIAA1549 homolog isoform X2

    UniProtKB/TrEMBL
    A0A218UY15
    Conserved Domains (3) summary
    pfam12877
    Location:1010 → 1680
    DUF3827; Domain of unknown function (DUF3827)
    cl25496
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25764
    Location:1626 → 1773
    PAT1; Topoisomerase II-associated protein PAT1

  8. XM_021536554.1 → XP_021392229.1  UPF0606 protein KIAA1549 homolog isoform X3

    UniProtKB/TrEMBL
    A0A218UY15
    Conserved Domains (3) summary
    pfam12877
    Location:1010 → 1679
    DUF3827; Domain of unknown function (DUF3827)
    cl25496
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25764
    Location:1625 → 1772
    PAT1; Topoisomerase II-associated protein PAT1

  9. XM_021536544.2 → XP_021392219.1  UPF0606 protein KIAA1549 homolog isoform X1

    UniProtKB/TrEMBL
    A0A218UY15
    Conserved Domains (3) summary
    pfam12877
    Location:1010 → 1684
    DUF3827; Domain of unknown function (DUF3827)
    cl25496
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25764
    Location:1630 → 1777
    PAT1; Topoisomerase II-associated protein PAT1

  10. XM_021536563.2 → XP_021392238.1  UPF0606 protein KIAA1549 homolog isoform X4

    UniProtKB/TrEMBL
    A0A218UY15
    Conserved Domains (3) summary
    pfam12877
    Location:1010 → 1675
    DUF3827; Domain of unknown function (DUF3827)
    cl25496
    Location:482 → 914
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25764
    Location:1621 → 1768
    PAT1; Topoisomerase II-associated protein PAT1
Nucleotide Protein
Heading Accession and Version

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