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ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110472015, updated on 14-Aug-2024

Summary

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Gene symbol
ARAP2
Gene description
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
Locus tag
RLOC_00005835
See related
Ensembl:ENSLSDG00000013977
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
33
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 4 NC_042569.1 (49942916..50052627)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656148.1 (80363..194899, complement)

Chromosome 4 - NC_042569.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110472016 Neighboring gene death domain containing 1 Neighboring gene uncharacterized LOC116183574 Neighboring gene putative RNA polymerase II subunit B1 CTD phosphatase RPAP2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,4,5-trisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
Names
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042569.1 Reference lonStrDom2 Primary Assembly

    Range
    49942916..50052627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031504565.1 → XP_031360425.1  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2

    Conserved Domains (6) summary
    cd09490
    Location:26 → 82
    SAM_Arap1,2,3; SAM domain of Arap1,2,3 (angiotensin receptor-associated protein)
    cd04385
    Location:1114 → 1293
    RhoGAP_ARAP; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in ARAPs. ARAPs (also known as centaurin deltas) contain, besides the RhoGAP domain, an Arf GAP, ankyrin repeat ras-associating, and PH domains. Since their ArfGAP activity ...
    cd13253
    Location:483 → 574
    PH1_ARAP; ArfGAP with RhoGAP domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain, repeat 1
    cd17227
    Location:1325 → 1422
    RA_ARAP2; Ras-associating (RA) domain found in Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 (ARAP2)
    cd08856
    Location:680 → 800
    ArfGap_ARAP2; ArfGap with Rho-Gap domain, ANK repeat and PH domain-containing protein 2
    cl17171
    Location:1433 → 1542
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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