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LSS lanosterol synthase [ Lonchura striata (white-rumped munia) ]

Gene ID: 110471683, updated on 14-Aug-2024

Summary

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Gene symbol
LSS
Gene description
lanosterol synthase
Locus tag
RLOC_00001902
See related
Ensembl:ENSLSDG00000001784
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
21
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 7 NC_042573.1 (5053868..5062356, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656071.1 (1008030..1016518, complement)

Chromosome 7 - NC_042573.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 19 Neighboring gene nucleoporin 35 Neighboring gene S100 calcium binding protein B Neighboring gene uncharacterized LOC116183846 Neighboring gene disco interacting protein 2 homolog A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables lanosterol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lanosterol synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042573.1 Reference lonStrDom2 Primary Assembly

    Range
    5053868..5062356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021532558.1 → XP_021388233.1  lanosterol synthase

    UniProtKB/TrEMBL
    A0A218UMJ3
    Related
    ENSLSDP00000002242.1, ENSLSDT00000002608.1
    Conserved Domains (1) summary
    cd02892
    Location:1 → 639
    SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...
Nucleotide Protein
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