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STOX1 storkhead box 1 [ Numida meleagris (helmeted guineafowl) ]

Gene ID: 110400585, updated on 15-Mar-2024

Summary

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Gene symbol
STOX1
Gene description
storkhead box 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Numida meleagris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
100 current NumMel1.0 (GCF_002078875.1) 5 NC_034413.1 (31731871..31742119)

Chromosome 5 - NC_034413.1Genomic Context describing neighboring genes Neighboring gene tet methylcytosine dioxygenase 1 Neighboring gene uncharacterized LOC110399229 Neighboring gene cell division cycle and apoptosis regulator 1 Neighboring gene nucleolar RNA helicase 2-like Neighboring gene nucleolar RNA helicase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034413.1 Chromosome 5 Reference NumMel1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
storkhead-box protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NumMel1.0 Primary Assembly

Genomic

  1. NC_034413.1 Reference NumMel1.0 Primary Assembly

    Range
    31731871..31742119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021400567.1 → XP_021256242.1  storkhead-box protein 1 isoform X3

  2. XM_021400566.1 → XP_021256241.1  storkhead-box protein 1 isoform X2

    Conserved Domains (1) summary
    pfam10264
    Location:7 → 83
    Stork_head; Winged helix Storkhead-box1 domain

  3. XM_021400565.1 → XP_021256240.1  storkhead-box protein 1 isoform X1

    Conserved Domains (1) summary
    pfam10264
    Location:15 → 91
    Stork_head; Winged helix Storkhead-box1 domain
Nucleotide Protein
Heading Accession and Version

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