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Pacsin2 protein kinase C and casein kinase substrate in neurons 2 [ Mus pahari (shrew mouse) ]

Gene ID: 110334726, updated on 15-Mar-2024

Summary

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Gene symbol
Pacsin2
Gene description
protein kinase C and casein kinase substrate in neurons 2
See related
Ensembl:MGP_PahariEiJ_G0020104
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Pacsin2 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 17 NC_034606.1 (48425266..48519682, complement)

Chromosome 17 - NC_034606.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110334597 Neighboring gene glutamate dehydrogenase 1, mitochondrial pseudogene Neighboring gene TTL family tubulin polyglutamylase complex subunit L1 Neighboring gene ATP synthase F(0) complex subunit B1, mitochondrial pseudogene Neighboring gene BCL2 interacting killer

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034606.1 Chromosome 17 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in caveola assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C and casein kinase substrate in neurons protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034606.1 Reference PAHARI_EIJ_v1.1

    Range
    48425266..48519682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029547731.1 → XP_029403591.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X4

    Conserved Domains (2) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:388 → 443
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2

  2. XM_029547729.1 → XP_029403589.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X2

    Related
    MGP_PahariEiJ_P0042606, MGP_PahariEiJ_T0042606.1
    Conserved Domains (3) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:429 → 484
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2
    pfam16601
    Location:348 → 428
    NPF; Rabosyn-5 repeating NPF sequence-motif

  3. XM_029547730.1 → XP_029403590.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X3

    Conserved Domains (2) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:390 → 445
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2

  4. XM_029547726.1 → XP_029403586.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X1

    Conserved Domains (3) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:431 → 486
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2
    pfam16601
    Location:350 → 430
    NPF; Rabosyn-5 repeating NPF sequence-motif

  5. XM_029547727.1 → XP_029403587.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X1

    Conserved Domains (3) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:431 → 486
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2
    pfam16601
    Location:350 → 430
    NPF; Rabosyn-5 repeating NPF sequence-motif

  6. XM_021216589.2 → XP_021072248.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X2

    Conserved Domains (3) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:429 → 484
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2
    pfam16601
    Location:348 → 428
    NPF; Rabosyn-5 repeating NPF sequence-motif

  7. XM_021216588.2 → XP_021072247.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X2

    Related
    MGP_PahariEiJ_P0042604, MGP_PahariEiJ_T0042604.1
    Conserved Domains (3) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:429 → 484
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2
    pfam16601
    Location:348 → 428
    NPF; Rabosyn-5 repeating NPF sequence-motif

  8. XM_029547728.1 → XP_029403588.1  protein kinase C and casein kinase substrate in neurons protein 2 isoform X1

    Conserved Domains (3) summary
    cd07679
    Location:18 → 275
    F-BAR_PACSIN2; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 2 (PACSIN2)
    cd11998
    Location:431 → 486
    SH3_PACSIN1-2; Src homology 3 domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN 2
    pfam16601
    Location:350 → 430
    NPF; Rabosyn-5 repeating NPF sequence-motif
Nucleotide Protein
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