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Rel REL proto-oncogene, NF-kB subunit [ Mus pahari (shrew mouse) ]

Gene ID: 110330736, updated on 15-Mar-2024

Summary

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Gene symbol
Rel
Gene description
REL proto-oncogene, NF-kB subunit
See related
Ensembl:MGP_PahariEiJ_G0016747
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 13 NC_034602.1 (6915943..6945433)

Chromosome 13 - NC_034602.1Genomic Context describing neighboring genes Neighboring gene BCL11 transcription factor A Neighboring gene uncharacterized LOC115065210 Neighboring gene poly(A) polymerase gamma Neighboring gene pseudouridine synthase 10 Neighboring gene peroxisomal biogenesis factor 13 Neighboring gene SANT and BTB domain regulator of CSR

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034602.1 Chromosome 13 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proto-oncogene c-Rel

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034602.1 Reference PAHARI_EIJ_v1.1

    Range
    6915943..6945433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021211025.2 → XP_021066684.1  proto-oncogene c-Rel

    Related
    MGP_PahariEiJ_P0030037, MGP_PahariEiJ_T0030037.1
    Conserved Domains (2) summary
    cd07933
    Location:8 → 179
    RHD-n_c-Rel; N-terminal sub-domain of the Rel homology domain (RHD) of c-Rel
    pfam16179
    Location:187 → 282
    RHD_dimer; Rel homology dimerisation domain
Nucleotide Protein
Heading Accession and Version

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