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P3h1 prolyl 3-hydroxylase 1 [ Mus pahari (shrew mouse) ]

Gene ID: 110322804, updated on 15-Mar-2024

Summary

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Gene symbol
P3h1
Gene description
prolyl 3-hydroxylase 1
See related
Ensembl:MGP_PahariEiJ_G0028723
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 6 NC_034595.1 (70367773..70383916)

Chromosome 6 - NC_034595.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 269 Neighboring gene chromosome 6 C1orf50 homolog Neighboring gene claudin 19 Neighboring gene Y-box binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034595.1 Chromosome 6 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034595.1 Reference PAHARI_EIJ_v1.1

    Range
    70367773..70383916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021199592.2 → XP_021055251.1  prolyl 3-hydroxylase 1

    Related
    MGP_PahariEiJ_P0079173, MGP_PahariEiJ_T0079173.1
    Conserved Domains (2) summary
    smart00702
    Location:483 → 681
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    TIGR02917
    Location:91 → 338
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
Nucleotide Protein
Heading Accession and Version

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