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Vcam1 vascular cell adhesion molecule 1 [ Mus pahari (shrew mouse) ]

Gene ID: 110319965, updated on 15-Mar-2024

Summary

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Gene symbol
Vcam1
Gene description
vascular cell adhesion molecule 1
See related
Ensembl:MGP_PahariEiJ_G0027008
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 4 NC_034593.1 (104821079..104840701, complement)

Chromosome 4 - NC_034593.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA17 Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene G protein-coupled receptor 88 Neighboring gene cell division cycle 14A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034593.1 Chromosome 4 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vascular cell adhesion protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034593.1 Reference PAHARI_EIJ_v1.1

    Range
    104821079..104840701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021195736.1 → XP_021051395.1  vascular cell adhesion protein 1

    Related
    MGP_PahariEiJ_P0071049, MGP_PahariEiJ_T0071049.1
    Conserved Domains (5) summary
    cd07689
    Location:404 → 502
    Ig_VCAM-1; Immunoglobulin (Ig)-like domain of vascular endothelial cell adhesion molecule-1 (VCAM-1, CD106) and intercellular cell adhesion molecule-1 (ICAM-1, CD54) and similar domains
    smart00408
    Location:238 → 298
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:321 → 400
    IG; Immunoglobulin
    pfam13927
    Location:515 → 583
    Ig_3; Immunoglobulin domain
    cl11960
    Location:37 → 112
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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