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Arx aristaless related homeobox [ Mus pahari (shrew mouse) ]

Gene ID: 110313509, updated on 15-Mar-2024

Summary

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Gene symbol
Arx
Gene description
aristaless related homeobox
See related
Ensembl:MGP_PahariEiJ_G0031770
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
6
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) X NC_034613.1 (80089351..80101283)

Chromosome X - NC_034613.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110313268 Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene DNA polymerase alpha 1, catalytic subunit Neighboring gene dnaJ homolog subfamily B member 6-like Neighboring gene small Cajal body-specific RNA 24

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034613.1 Chromosome X Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein ARX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034613.1 Reference PAHARI_EIJ_v1.1

    Range
    80089351..80101283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021187846.2 → XP_021043505.1  homeobox protein ARX

    Related
    MGP_PahariEiJ_P0089722, MGP_PahariEiJ_T0089722.1
    Conserved Domains (2) summary
    pfam00046
    Location:336 → 388
    Homeobox; Homeobox domain
    pfam03826
    Location:530 → 548
    OAR; OAR domain

  2. XM_021187845.1 → XP_021043504.1  homeobox protein ARX

    Related
    MGP_PahariEiJ_P0089721, MGP_PahariEiJ_T0089721.1
    Conserved Domains (2) summary
    pfam00046
    Location:336 → 388
    Homeobox; Homeobox domain
    pfam03826
    Location:530 → 548
    OAR; OAR domain
Nucleotide Protein
Heading Accession and Version

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